BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B10SP1|AL428012
(1049 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1282 926 0.0
3x_Contig1496 492 e-139
>3x_Contig1282
Length = 5781
Score = 926 bits (465), Expect = 0.0
Identities = 477/483 (98%), Gaps = 1/483 (0%)
Strand = Plus / Plus
Query: 1 agtgtttgtgcggattttttatatttttvagcatttgttttctttcacttggaatcgttg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5300 agtgtttgtgcggattttttatatttttaagcatttgttttctttcacttggaatcgttg 5359
Query: 61 tgtgtggagttgttgttgtgcctgcccagtcggttttttagcaactttttaatcaaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5360 tgtgtggagttgttgttgtgcctgcccagtcggttttttagcaactttttaatcaaagta 5419
Query: 121 ccaaccttttaaaggcctgtttcgtgtttcgagtttctgtatcagattcttctcatcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5420 ccaaccttttaaaggcctgtttcgtgtttcgagtttctgtatcagattcttctcatcata 5479
Query: 181 ccttccttctttgatatcaacaatattaccaattagcagtgtctttttttttattggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5480 ccttccttctttgatatcaacaatattaccaattagcagtgtctttttttttattggtgc 5539
Query: 241 attattgagtgtttttgccctaatttgactttattcgaatcgagttgggttcatatttma 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5540 attattgagtgtttttgccctaatttgactttattcgaatcgagttgggttcatatttaa 5599
Query: 301 gattgcmacatcacaccgatagactcaactttagcatttttctttacagttgagggtggg 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5600 gattgcaacatcacaccgatagactcaactttagcatttttctttacagttgagggtggg 5659
Query: 361 gctcttctttatattaacccgcggtccattttacttccggactttcgagaaacttgcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5660 gctcttctttatattaacccgcggtccattttacttccggactttcgagaaacttgcctt 5719
Query: 421 aactgcctattctgatttttgtcataattggvtcaggactgtcaaactaattgavagagt 480
||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 5720 aactgcctattctgatttttgtcataattggatcaggactgtcaaactaatt-aaagagt 5778
Query: 481 agt 483
|||
Sbjct: 5779 agt 5781
>3x_Contig1496
Length = 9544
Score = 492 bits (247), Expect = e-139
Identities = 289/295 (97%), Gaps = 6/295 (2%)
Strand = Plus / Plus
Query: 752 gaaaagttatcctgctaatagataaagttggccaaatgaagatttccaacgaagaatctg 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gaaaagttatcctgctaatagataaagttggccaaatgaagatttccaacgaagaatctg 336
Query: 812 ctagggactcgaggcatccagatagcaggaaaaggaaagttgctaagagagcatgcctcg 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctagggactcgaggcatccagatagcaggaaaaggaaagttgctaagagagcatgcctcg 396
Query: 872 cttgtcgagagagaaagattaaatgtgacggtgaggctaatccagatccgagcggtgggc 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cttgtcgagagagaaagattaaatgtgacggtgaggctaatccagatccgagcggtgggc 456
Query: 932 ctgg-aaatgcactaactgtgttcgtagcactcttgaatgtgtttttgtcg-cagtaatc 989
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 457 ctggaaaatgcactaactgtgttcgtagcactcttgaatgtgtttttgtcgccagtaatc 516
Query: 990 gtggtggtag-agagtatttgat-aatcg-agcggtatatatca-cgcctagttc 1040
|||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 517 gtggtggtagaagagtatttgataaatcgaagcggtatatatcaccgcctagttc 571
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9101
Number of Sequences: 1807
Number of extensions: 9101
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 2
length of query: 1049
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1033
effective length of database: 10,329,639
effective search space: 10670517087
effective search space used: 10670517087
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)